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FSL Course 2025

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Course Information

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Course B

FSL course on functional and structural brain image analysis

This year the course is being delivered via online lectures and with two separate practical periods:

Dates: 15th September 2025 – 26th September 2025

For Course A and Course B timing please refer to this timetable: https://open.win.ox.ac.uk/pages/fslcourse/website/upcoming.html#Timetable

Please carefully book the course to best suit your time zone.

Course Code

HM-FSL2025

Course Leader

Janine Bijsterbosch and Ludovica Griffanti
Course Description

Learn the theory and practice of using FSL for structural, functional and diffusion image analysis. The course is designed for people at all skill levels, from those with little or no experience through to intermediate users of FSL. This course is based around a set of self-paced, hands-on, guided practicals, supported by expert tutors and a broad set of accessible lectures. Each daily practical session will last half a day, with an additional online lecture to watch beforehand. The course will run for two weeks, and you can select from two available time zones; course A (earlier time zone) or course B (later time zone). After completing the course, attendees should be able to analyse their own structural, functional and diffusion MRI data sets.

Each attendee will need to have their own computer (Mac, Windows, Linux) and a reasonable internet connection in order to access the cloud-based desktop and for video conferencing with tutors in the guided practical sessions. 

We welcome all skill levels, and we have self-paced primer material to get you started before attending. The methods covered are primarily aimed at applications in basic science and clinical research (not clinical practice). We will be inclusive, supporting users in all countries, and we want to support our diverse users at all career stages.

All lectures and practical material will be in English.

This course does not provide any CME credits.

For more information please visit the course website https://open.win.ox.ac.uk/pages/fslcourse/website/


If you have any queries about the course, please email fslcourse@fmrib.ox.ac.uk

Registration Fees
Student/Pre-PhD Research Assistant £250
Postdoc/Faculty/Other Non-student Academic £400
Student/Pre-PhD Research Assistant (low-income country) £50 *
Postdoc/Faculty/Other Non-student Academic (low-income country) £75 *
Commercial £1000

For a list of low-income countries see: https://en.wikipedia.org/wiki/List_of_sovereign_states_by_research_and_development_spending

*Only participants from countries below 250 threshold of ‘Expenditures on R&D per capita’ will qualify for discounted registration. For link to the ‘Low and Middle Income Countries Registration Website’ please email fslcourse@fmrib.ox.ac.uk from your institutional email address, with your PI/supervisor in CC. We will then authorise your registration and reply to the email with the link to the online store at the discounted rate.

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Course B
15/09/202526/09/2025